黃桿菌科
黄杆菌目的一科细菌
黃桿菌科(學名:Flavobacteriaceae)為黃桿菌目的一科細菌。此科的模式屬為黃桿菌屬(Flavobacterium)。黃桿菌科為環境細菌。[1][2] 大多數菌種是需氧的,而有些是微需氧甚至是厭氧的;例如二氧化碳嗜纖維菌屬(Capnocytophaga)和考諾尼亞菌屬(Coenonia)。[3]
黃桿菌科![]() | |
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科學分類 ![]() | |
域: | 細菌域 Bacteria |
門: | 擬桿菌門 Bacteroidota |
綱: | 擬桿菌綱 Bacteroidia |
目: | 黃桿菌目 Flavobacteriales |
科: | 黃桿菌科 Flavobacteriaceae Reichenbach 1992 |
模式屬 | |
黃桿菌屬 Flavobacterium Bergey et al. 1923
| |
異名 | |
Sphingomonadaceae Kosako et al. 2000 |
下級分類
編輯本科包括以下屬:[4]
- Abyssalbus Xu et al. 2022
- Abyssalbus ytuae Xu et al. 2022[5]
- Actibacter Kim et al. 2008
- Aegicerativicinus Huang et al. 2022
- Aegicerativicinus sediminis Huang et al. 2022[6]
- Aequorivita Bowman and Nichols 2002
- Aequorivita aestuarii (Kim et al., 2010) Hahnke et al., 2017
- Aequorivita antarctica Bowman & Nichols, 2002
- Aequorivita aquimaris (Thevarajoo et al. 2016) García-López et al. 2020
- Aequorivita capsosiphonis Park et al., 2009
- Aequorivita crocea Bowman & Nichols, 2002
- Aequorivita echinoideorum (Lin et al., 2015) Hahnke et al., 2017
- Aequorivita lipolytica Bowman & Nichols, 2002
- Aequorivita marisscotiae Liu et al. 2023[7]
- Aequorivita nionensis (Rajasabapathy et al., 2015) Hahnke et al., 2017
- Aequorivita sinensis Wang et al. 2020[8]
- Aequorivita soesokkakensis (Park et al., 2014) Hahnke et al., 2017
- Aequorivita sublithincola Bowman & Nichols, 2002
- Aequorivita viscosa Liu et al., 2013
- Aequorivita vitellina Wang et al. 2023[9]
- Aequorivita vladivostokensis (Nedashkovskaya et al., 2003) Hahnke et al., 2017
- Aequorivita xiaoshiensis Wang et al. 2023[9]
- 潮汐桿菌屬 Aestuariibaculum Jeong et al. 2013
- Aestuariicola Yoon et al. 2008,為Lutimonas Yang et al. 2007的異名
- Aestuariimonas Park et al. 2018
- Aestuariimonas insulae Park et al. 2018
- Aestuariivivens Park et al. 2015
- 海藻桿菌屬 Algibacter Nedashkovskaya et al. 2004
- Algitalea Yoon et al. 2015
- Algitalea ulvae Yoon et al. 2015
- Allomuricauda Deshmukh and Oren 2023[11]
- Allomuricauda abyssi (Wang et al. 2022) Deshmukh and Oren 2023
- Allomuricauda aequoris (Guo et al. 2020) Deshmukh and Oren 2023
- Allomuricauda algicola (Kim et al. 2020) Deshmukh and Oren 2023
- Allomuricauda alvinocaridis (Liu et al. 2020) Deshmukh and Oren 2023
- Allomuricauda amoyensis (Li et al. 2019) Deshmukh and Oren 2023
- Allomuricauda amphidinii (Chen et al. 2021) Deshmukh and Oren 2023
- Allomuricauda antarctica (Wu et al. 2013) Deshmukh and Oren 2023
- Allomuricauda aquimarina (Yoon et al. 2005) Deshmukh and Oren 2023
- Allomuricauda aurantiaca (Liang et al. 2021) Deshmukh and Oren 2023
- Allomuricauda aurea (Zhao et al. 2022) Deshmukh and Oren 2023
- Allomuricauda beolgyonensis (Lee et al. 2012) Deshmukh and Oren 2023
- Allomuricauda chongwuensis (Chen et al. 2022) Deshmukh and Oren 2023
- Allomuricauda eckloniae (Bae et al. 2007) Deshmukh and Oren 2023
- Allomuricauda flava (Yoon and Oh 2012) Deshmukh and Oren 2023
- Allomuricauda flavescens (Yoon et al. 2005) Deshmukh and Oren 2023
- Allomuricauda hadalis (Zhang et al. 2020) Deshmukh and Oren 2023
- Allomuricauda hymeniacidonis (Park 2019) Deshmukh and Oren 2023
- Allomuricauda indica (Zhang et al. 2018) Deshmukh and Oren 2023
- Allomuricauda iocasae (Liu et al. 2018) Deshmukh and Oren 2023
- Allomuricauda koreensis (García-López et al. 2020) Deshmukh and Oren 2023
- Allomuricauda lutaonensis (Arun et al. 2009) Deshmukh and Oren 2023
- Allomuricauda lutea (Wang et al. 2017) Deshmukh and Oren 2023
- Allomuricauda lutimaris (Yoon et al. 2008) Deshmukh and Oren 2023
- Allomuricauda marina (Su et al. 2017) Deshmukh and Oren 2023
- Allomuricauda maritima (Guo et al. 2020) Deshmukh and Oren 2023
- Allomuricauda nanhaiensis (Dang et al. 2019) Deshmukh and Oren 2023
- Allomuricauda oceanensis (Guo et al. 2020) Deshmukh and Oren 2023
- Allomuricauda oceani (Dong et al. 2020) Deshmukh and Oren 2023
- Allomuricauda ochracea (Kim et al. 2020) Deshmukh and Oren 2023
- Allomuricauda olearia (Hwang et al. 2009) Deshmukh and Oren 2023
- Allomuricauda onchidii (Liang et al. 2021) Deshmukh and Oren 2023
- Allomuricauda pacifica (Zhang et al. 2015) Deshmukh and Oren 2023
- Allomuricauda parva (Liang et al. 2021) Deshmukh and Oren 2023
- Allomuricauda profundi (Zhao et al. 2022) Deshmukh and Oren 2023
- Allomuricauda ruestringensis (Bruns et al. 2001) Deshmukh and Oren 2023
- Allomuricauda sediminis (Zhu et al. 2021) Deshmukh and Oren 2023
- Allomuricauda spongiicola (Shin and Park 2023) Deshmukh and Oren 2023
- Allomuricauda taeanensis (Kim et al. 2013) Deshmukh and Oren 2023
- Allomuricauda zhangzhouensis (Yang et al. 2013) Deshmukh and Oren 2023
- Amniculibacterium Chen et al. 2020
- Amniculibacterium aquaticum Chen et al. 2020
- Antarcticibacterium Li et al. 2018
- Antarcticibacterium arcticum Lee et al. 2020
- Antarcticibacterium flavum Li et al. 2018
- Antarcticimonas Yang et al. 2014
- Antarcticimonas flava Yang et al. 2014
- Aquaticitalea Xamxidin et al. 2016
- Aquibacter Hameed et al. 2014
- 海水桿菌屬 Aquimarina Nedashkovskaya et al. 2005
- Arcticiflavibacter Liu et al. 2016
- 棲砂桿菌屬 Arenibacter Ivanova et al. 2001
- Arenitalea Zhang et al. 2013
- Ascidiimonas Yoon et al. 2016
- Aurantiacicella Teramoto et al. 2016
- Aurantibacter García-López et al. 2020
- Aurantivirga Song et al. 2015
- Aureibaculum Zhao et al. 2021
- Aureicoccus Park et al. 2013
- Aureisphaera Yoon et al. 2015
- Aureitalea Park et al. 2012
- Aureivirga Haber et al. 2013
- 比茲奧氏菌屬 Bizionia Nedashkovskaya et al. 2005
- 二氧化碳嗜纖維菌屬 Capnocytophaga Leadbetter et al. 1982
- Cellulophaga Johansen et al. 1999
- 長城站菌屬 Changchengzhania Wang et al. 2017
- Changchengzhania lutea Wang et al. 2017[12]
- 克里斯蒂安菌屬 Christiangramia Deshmukh and Oren 2023
- Citreitalea Yoon et al. 2014,檸檬色桿菌屬
- Citreitalea marina Yoon et al. 2014
- 考諾尼亞菌屬 Coenonia Vandamme et al. 1999
- Confluentibacter Park et al. 2016
- Confluentibacter citreus Han et al. 2017
- Confluentibacter flavum Li et al. 2018
- Confluentibacter lentus Park et al. 2016
- Confluentibacter sediminis Wei et al. 2019
- Constantimarinum Yang et al. 2023
- Constantimarinum furrinae Yang et al. 2023[13]
- Corallibacter Kim et al. 2012
- Corallibacter vietnamensis Kim et al. 2012
- Costertonia Kwon et al. 2006
- Croceibacter Cho and Giovannoni 2003
- 藏紅花色纖細桿菌屬 Croceitalea Lee et al. 2008
- 橘黃色桿菌屬 Croceivirga Hu et al. 2017
- Daejeonia Siddiqi et al. 2017
- 獨島菌屬 Dokdonia Yoon et al. 2005
- 東海菌屬 Donghaeana Yoon et al. 2006,為Nonlabens Lau et al. 2005的異名
- Eudoraea Alain et al. 2008
- Euzebyella Lucena et al. 2010
- Euzebyella algicola Kwon et al. 2018
- Euzebyella marina Zhang et al. 2017
- Euzebyella saccharophila Lucena et al. 2010
- Faecalibacter Chen et al. 2020
- Faecalibacter bovis Li et al. 2021
- Faecalibacter macacae Chen et al. 2020
- Faecalibacter rhinopitheci Wang et al. 2021
- 鞭毛單胞菌屬 Flagellimonas Bae et al. 2007
- 黃胞菌屬 Flavicella Teramoto and Nishijima, 2015
- Flavihalobacter Yin et al. 2021,為Psychroserpens Bowman et al. 1997的異名
- Flavimarina Nedashkovskaya et al., 2015
- Flaviramulus Einen and Øvreås, 2006
- Flavirhabdus Shakeela et al. 2015
- 黃顏色桿菌屬 Flavivirga Yi et al. 2012
- 黃桿菌屬 Flavobacterium Bergey et al. 1923
- 華美菌屬 Formosa Ivanova et al. 2004
- Frondibacter Yoon et al. 2015
- Fulvibacter Khan et al. 2008
- Gaetbulibacter Jung et al. 2005
- Gaetbulimicrobium Yoon et al. 2006,為Aquimarina Nedashkovskaya et al. 2005的異名
- Galbibacter Khan et al. 2007
- Gangjinia Lee et al. 2011
- Gelatiniphilus Tang et al. 2016
- 冰冷桿菌屬 Gelidibacter Bowman et al. 1997
- Geojedonia Park et al. 2013
- Gillisia Van Trappen et al. 2004
- Gillisia hiemivivida Bowman and Nichols 2005
- Gillisia illustrilutea Bowman and Nichols 2005
- Gillisia limnaea Van Trappen et al. 2004
- Gillisia lutea Vidal-Verdú et al. 2023[16]
- Gillisia marina Roh et al. 2013
- Gillisia mitskevichiae Nedashkovskaya et al. 2005
- Gillisia myxillae Lee et al. 2006
- Gillisia sandarakina Bowman and Nichols 2005
- Gilvibacter Khan et al. 2007
- 革蘭菌屬 Gramella Nedashkovskaya et al. 2005
- 鹽黃桿菌屬 Haloflavibacter Feng et al. 2020
- Hanstruepera Hameed et al. 2015
- Hoppeia Kwon et al. 2014
- Hwangdonia Jung et al. 2013
- 李玄順菌屬 Hyunsoonleella Yoon et al. 2010
- Ichthyenterobacterium Shakeela et al. 2015
- Imtechella Surendra et al. 2012
- Jejudonia Park et al. 2013
- Jejuia Lee et al. 2009
- 蘇特氏菌屬 Joostella Quan et al. 2008
- 科迪亞菌屬 Kordia Sohn et al. 2004
- Kriegella Nedashkovskaya et al. 2008
- Krokinobacter Khan et al. 2006,為Dokdonia Yoon et al. 2005的異名
- 湖養菌屬 Lacinutrix Bowman and Nichols 2005
- 萊文虎克菌屬 Leeuwenhoekiella Nedashkovskaya et al. 2005
- Leptobacterium Mitra et al. 2009
- Litoribaculum Jin and Jeon 2015
- Lutaonella Arun et al. 2009
- 淤泥桿菌屬 Lutibacter Choi and Cho 2006
- Lutimonas Yang et al. 2007
- Lutimonas halocynthiae Kim et al. 2014
- Lutimonas saemankumensis (Yoon et al. 2008) Kim et al. 2014
- Lutimonas vermicola Yang et al. 2007
- Lutimonas zeaxanthinifaciens Jung et al. 2024
- 紅樹林單胞菌屬 Mangrovimonas Li et al. 2013
- 棲海桿菌屬 Maribacter Nedashkovskaya et al. 2004
- Mariniflexile Nedashkovskaya et al. 2006
- Mariniflexile aquimaris Jung et al., 2012
- Mariniflexile fucanivorans Barbeyron et al., 2008
- Mariniflexile gromovii Nedashkovskaya et al., 2006
- Mariniflexile jejuense Jung & Yoon, 2013
- Mariniflexile maritimum Ko et al. 2021[17]
- Mariniflexile ostreae Park et al., 2015
- Mariniflexile soesokkakense Park et al., 2014
- Marinirhabdus Wu et al. 2016
- Marinivirga Park et al. 2013
- Maripseudobacter Chen et al. 2017,異名
- Maritimimonas Park et al. 2009
- Marixanthomonas Romanenko et al. 2007
- Marixanthotalea Fu et al. 2023
- Marixanthotalea marina Fu et al. 2023[18]
- Meridianimaribacter Wang et al. 2010
- Mesoflavibacter Asker et al. 2008
- 中度喜鹽桿菌屬 Mesohalobacter Feng et al. 2020
- 海研站菌屬 Mesonia Nedashkovskaya et al. 2003
- 鼠尾菌屬 Muricauda Bruns et al. 2001
- Muriicola Kahng et al. 2010
- Muriicola jejuensis Kahng et al., 2010
- Muriicola marianensis Hu et al., 2015
- Muriicola soli Kang et al. 2021[19]
- 類香味菌屬 Myroides Vancanneyt et al. 1996
- Namhaeicola Jung et al. 2012
- Neptunitalea Yoon and Kasai 2015
- Neptunitalea chrysea Yoon and Kasai 2015[20]
- Nonlabens Lau et al. 2005
- Oceanihabitans Zhang et al. 2016
- Olleya Mancuso Nichols et al. 2005
- Paenimyroides Zhang et al. 2023
- Paenimyroides aestuarii Zhang et al. 2023[21]
- Paenimyroides anatoliense (Kacagan et al. 2013) Zhang et al. 2023,也拼作:Paenimyroides anatoliensis
- Paenimyroides aquimaris (García-López et al. 2020) Zhang et al. 2023
- Paenimyroides baculatum (Chhetri et al. 2021) Zhang et al. 2023
- Paenimyroides ceti (Vela et al. 2007) Zhang et al. 2023
- Paenimyroides cloacae (Liu et al. 2017) Zhang et al. 2023
- Paenimyroides naphthae (Chaudhary and Kim 2018) Zhang et al. 2023
- Paenimyroides tangerinum (Li et al. 2020) Zhang et al. 2023
- Paenimyroides ummariense (Lata et al. 2012) Zhang et al. 2023
- Paenimyroides viscosum (Li et al. 2020) Zhang et al. 2023
- 副研站菌屬 Paramesonia Wang et al. 2020
- Pareuzebyella Huang et al. 2021
- Patiriisocius Kawano et al. 2020
- Patiriisocius marinus
- Patiriisocius marinistellae Kawano et al. 2020[22]
- Paucihalobacter Wu et al. 2020
- Pelagihabitans Wang et al. 2020
- Persicivirga O'Sullivan et al. 2006,為Nonlabens Lau et al. 2005的異名
- Pibocella Nedashkovskaya et al. 2005
- Planktosalinus Zhong et al. 2016
- 極地桿菌屬 Polaribacter Gosink et al. 1998
- Pontimicrobium Janthra et al. 2020
- Pontirhabdus Yi et al. 2011,為Algibacter Nedashkovskaya et al. 2004的異名
- 喜濱珊瑚菌屬 Poritiphilus Wang et al. 2020
- Postechiella Lee et al. 2012
- Pricia Yu et al. 2012
- Pseudalgibacter Li et al. 2022
- Pseudalgibacter alginicilyticus (Sun et al. 2016) Li et al. 2022[23]
- Pseudobizionia Park et al. 2018
- Pseudofulvibacter Yoon et al. 2013
- 偽黏着桿菌屬 Pseudotenacibaculum Huang et al. 2016
- Pseudozobellia Nedashkovskaya et al. 2009
- 冷彎曲菌屬 Psychroflexus Bowman et al. 1999
- 冷蛇菌屬 Psychroserpens Bowman et al. 1997
- Pustulibacterium Wang et al. 2013
- Robertkochia Hameed et al. 2014
- Robiginitalea Cho and Giovannoni 2004
- Robiginitalea aestuariiviva Cao et al. 2023[24]
- Robiginitalea aurantiaca Zhou et al. 2023
- Robiginitalea biformata Cho and Giovannoni 2004
- Robiginitalea marina Xuan et al. 2023
- Robiginitalea myxolifaciens Manh et al. 2008
- Robiginitalea sediminis Zhang et al. 2020
- Sabulilitoribacter Park et al. 2014
- 需鹽桿菌屬 Salegentibacter McCammon and Bowman 2000
- 鹽坑微菌屬 Salinimicrobium Lim et al. 2008
- Sandarakinotalea Khan et al. 2006,為Nonlabens Lau et al. 2005的異名
- Saonia Fagervold et al. 2017
- Sediminibacter Khan et al. 2007
- 棲沉積物桿菌屬 Sediminicola Khan et al. 2006
- 西南海棲菌屬 Seonamhaeicola Park et al. 2014
- Siansivirga Hameed et al. 2013
- 中華微桿菌屬 Sinomicrobium Xu et al. 2013
- Snuella Yi and Chun 2011
- Spongiibacterium Yoon and Oh 2012,為'Flagellimonas Bae et al. 2007的異名
- Spongiiferula Yoon et al. 2016
- Spongiimicrobium Yoon et al. 2016
- Spongiivirga Yoon et al. 2015
- Stanierella Nedashkovskaya et al. 2005,為Aquimarina Nedashkovskaya et al. 2005的異名
- Stenothermobacter Lau et al. 2006,為Nonlabens Lau et al. 2005的異名
- Subsaxibacter Bowman and Nichols, 2005
- Subsaximicrobium Bowman and Nichols, 2005
- Sungkyunkwania Yoon et al. 2013
- Sungkyunkwania multivorans Yoon et al. 2013[25]
- Taeania Jung et al. 2016
- 濟州島古名菌屬 Tamlana Lee 2007
- 黏着桿菌屬 Tenacibaculum Suzuki et al. 2001
- Thermobacterium Chen et al. 2023
- Thermobacterium salinum Chen et al. 2023[26]
- Ulvibacter Nedashkovskaya et al. 2004
- Ulvibacterium Zhang et al. 2021
- Urechidicola Shin and Yi 2020
- Vitellibacter Nedashkovskaya et al. 2003,為Aequorivita Bowman and Nichols 2002的異名
- Wangia Qin et al. 2007,為王祖農菌屬 (Zunongwangia Qin et al. 2007)的異名
- 莊文穎氏菌屬 Wenyingzhuangia Liu et al. 2014
- 維諾格拉斯基氏菌屬 Winogradskyella Nedashkovskaya et al. 2005
- 臥蠶菌屬 Wocania He et al. 2020
- Xanthomarina Vaidya et al. 2015
- Xanthomarina gelatinilytica Vaidya et al. 2015
- Xanthomarina spongicola (Yoon and Oh 2011) García-López et al. 2020
- Yeosuana Kwon et al. 2006
- Yeosuana aromativorans Kwon et al., 2006
- Yeosuana marina Zhang et al. 2020[27]
- Zeaxanthinibacter Asker et al. 2007
- Zeaxanthinibacter aestuarii Lee et al. 2016
- Zeaxanthinibacter enoshimensis Asker et al. 2007
- 周氏菌屬 Zhouia Liu et al. 2006,周培瑾氏菌,以中科院微生物研究所研究員周培瑾的名字命名
- Zhouia amylolytica Liu et al. 2006
- Zhouia spongiae Zhuang et al. 2018
- Zobellia Barbeyron et al. 2001
- Zobellia alginiliquefaciens Barbeyron et al. 2023[28]
- Zobellia amurskyensis Nedashkovskaya et al. 2004
- Zobellia barbeyronii Nedashkovskaya et al. 2022
- Zobellia galactanivorans corrig. Barbeyron et al. 2001
- Zobellia galactanovorans Barbeyron et al. 2001
- Zobellia laminariae Nedashkovskaya et al. 2004
- Zobellia nedashkovskayae Barbeyron et al. 2021
- Zobellia roscoffensis Barbeyron et al. 2021
- Zobellia russellii Nedashkovskaya et al. 2004
- Zobellia uliginosa (ZoBell and Upham 1944) Barbeyron et al. 2001
- 王祖農菌屬 Zunongwangia Qin et al. 2007
參考文獻
編輯- ^ 引用錯誤:沒有為名為
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- LPSN - List of Prokaryotic names with Standing in Nomenclature